• 文献标题:   Discrimination and isolation of the virus from free RNA fragments for the highly sensitive measurement of SARS-CoV-2 abundance on surfaces using a graphene oxide nano surface
  • 文献类型:   Article
  • 作  者:   YOO HJ, LI YG, CUI WY, CHUNG W, SHIN YB, KIM YS, BAEK C, MIN J
  • 作者关键词:   sarscov2, graphene oxide, virus isolation, molecular diagnostic
  • 出版物名称:   NANO CONVERGENCE
  • ISSN:   2196-5404
  • 通讯作者地址:  
  • 被引频次:   7
  • DOI:   10.1186/s40580-021-00281-8
  • 出版年:   2021

▎ 摘  要

It is highly important to sensitively measure the abundance of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) on various surfaces. Here, we present a nucleic acid-based detection method consisting of a new sample preparation protocol that isolates only viruses, not the free RNA fragments already present on the surfaces of indoor human-inhabited environments, using a graphene oxide-coated microbead filter. Wet wipes (100 cm(2)), not cotton swabs, were used to collect viruses from environmental surfaces with large areas, and viruses were concentrated and separated with a graphene oxide-coated microbead filter. Viral RNA from virus was recovered 88.10 +/- 8.03% from the surface and free RNA fragment was removed by 99.75 +/- 0.19% from the final eluted solution. When we tested the developed method under laboratory conditions, a 10-fold higher viral detection sensitivity (Detection limit: 1 pfu/100 cm(2)) than the current commercial protocol was observed. Using our new sample preparation protocol, we also confirmed that the virus was effectively removed from surfaces after chemical disinfection; we were unable to measure the disinfection efficiency using the current commercial protocol because it cannot distinguish between viral RNA and free RNA fragments. Finally, we investigated the presence of SARS-CoV-2 and bacteria in 12 individual negative pressure wards in which patients with SARS-CoV-2 infection had been hospitalized. Bacteria (based on 16 S DNA) were found in all samples collected from patient rooms; however, SARS-CoV-2 was mainly detected in rooms shared by two patients.