• 文献标题:   A joint MD/QM study on the possibility of alkaloids detection by cucurbiturils and graphene oxide-cucurbituril composites
  • 文献类型:   Article
  • 作  者:   MEHRANFAR A, IZADYAR M, SHAMKHALI AN
  • 作者关键词:   cucurbituril, graphene oxide, morphine, codeine, thebaine, molecular dynamic, sensor
  • 出版物名称:   JOURNAL OF MOLECULAR LIQUIDS
  • ISSN:   0167-7322 EI 1873-3166
  • 通讯作者地址:   Ferdowsi Univ Mashhad
  • 被引频次:   2
  • DOI:   10.1016/j.molliq.2018.10.092
  • 出版年:   2018

▎ 摘  要

In the present study, molecular dynamics (MD) simulations and density functional theory (DFT) were applied to monitor the sensing procedure of some alkaloid molecules by cucurbit[n]urils (CB[n]s, [n] is the number of glycoluril unit). The stability of alkaloid molecules inside the CB[n] complexes, which are shown as alkaloid@CB[n], were investigated after 50 ns MD simulations. An acceptable selectivity for thebaine in the presence of CB [8] and CB [10] was confirmed in water and methanol, respectively. DFT calculations confirmed the dispersion interaction as an effective driving force for the alkaloid encapsulation inside CB[n]s. Different analyses of natural bond orbital, quantum theory of atoms in molecules and density of states were applied to have an insight into the electronic processes during the alkaloid@CB[n] complex formation and feasibility of alkaloid sensing. Finally, to determine the role of graphene oxide (GO) in the designing of the new chemo-sensors, a CB[n]/GO composite was proposed and simulated by MD method. On the basis of the theoretical results, graphene oxide improves the encapsulation ability of CB[n]s towards the studied alkaloids, especially CB [10]/GO against codeine. (C) 2018 Elsevier B.V. All rights reserved.